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This page was generated on 2022-01-14 13:06:37 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for LOBSTAHS on tokay2


To the developers/maintainers of the LOBSTAHS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/LOBSTAHS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1007/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LOBSTAHS 1.20.0  (landing page)
Henry Holm
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/LOBSTAHS
git_branch: RELEASE_3_14
git_last_commit: f4e6a04
git_last_commit_date: 2021-10-26 12:28:57 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: LOBSTAHS
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/LOBSTAHS_1.20.0.tar.gz && rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL LOBSTAHS_1.20.0.zip && rm LOBSTAHS_1.20.0.tar.gz LOBSTAHS_1.20.0.zip
StartedAt: 2022-01-13 05:43:22 -0500 (Thu, 13 Jan 2022)
EndedAt: 2022-01-13 05:44:59 -0500 (Thu, 13 Jan 2022)
EllapsedTime: 96.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/LOBSTAHS_1.20.0.tar.gz && rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL LOBSTAHS_1.20.0.zip && rm LOBSTAHS_1.20.0.tar.gz LOBSTAHS_1.20.0.zip
###
##############################################################################
##############################################################################


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100 2225k  100 2225k    0     0  3916k      0 --:--:-- --:--:-- --:--:-- 3918k

install for i386

* installing *source* package 'LOBSTAHS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'polarity<-' in package 'LOBSTAHS'
** help
*** installing help indices
  converting help for package 'LOBSTAHS'
    finding HTML links ... done
    LOBSet-class                            html  
    finding level-2 HTML links ... done

    LOBSet                                  html  
    LOBdbase-class                          html  
    LOBdbase                                html  
    LOBdefaults                             html  
    doLOBscreen                             html  
    exportDBtoCSV                           html  
    extractLOBdbasedata                     html  
    generateLOBdbase                        html  
    getLOBpeaklist                          html  
    loadLOBdbase                            html  
** building package indices
** installing vignettes
   'LOBSTAHS.Rmd' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for 'polarity<-'
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for 'polarity<-'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'LOBSTAHS' ...
** testing if installed package can be loaded
Warning: multiple methods tables found for 'polarity<-'
* MD5 sums
packaged installation of 'LOBSTAHS' as LOBSTAHS_1.20.0.zip
* DONE (LOBSTAHS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'LOBSTAHS' successfully unpacked and MD5 sums checked