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This page was generated on 2022-04-13 12:06:46 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for KCsmart on tokay2


To the developers/maintainers of the KCsmart package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/KCsmart.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 977/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
KCsmart 2.52.0  (landing page)
Jorma de Ronde
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/KCsmart
git_branch: RELEASE_3_14
git_last_commit: e6b33a9
git_last_commit_date: 2021-10-26 11:53:01 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: KCsmart
Version: 2.52.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KCsmart_2.52.0.tar.gz && rm -rf KCsmart.buildbin-libdir && mkdir KCsmart.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KCsmart.buildbin-libdir KCsmart_2.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KCsmart_2.52.0.zip && rm KCsmart_2.52.0.tar.gz KCsmart_2.52.0.zip
StartedAt: 2022-04-12 04:33:42 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:35:00 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 78.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KCsmart_2.52.0.tar.gz && rm -rf KCsmart.buildbin-libdir && mkdir KCsmart.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KCsmart.buildbin-libdir KCsmart_2.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KCsmart_2.52.0.zip && rm KCsmart_2.52.0.tar.gz KCsmart_2.52.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  354k  100  354k    0     0  1167k      0 --:--:-- --:--:-- --:--:-- 1169k

install for i386

* installing *source* package 'KCsmart' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Creating a generic function for 'write.table' from package 'utils' in package 'KCsmart'
** help
*** installing help indices
  converting help for package 'KCsmart'
    finding HTML links ... done
    KCData-class                            html  
    KCsmart-package                         html  
    KcghData-class                          html  
    KcghDataMirror-class                    html  
    KcghDataSplit-class                     html  
    KcghDataSum-class                       html  
    calcSpm                                 html  
    calcSpmCollection                       html  
    compKc-class                            html  
    compKcSigRegions-class                  html  
    compareSpmCollection                    html  
    findSigLevelFdr                         html  
    findSigLevelTrad                        html  
    getSigRegionsCompKC                     html  
    getSigSegments                          html  
    hsMirrorLocs                            html  
    hsSampleData                            html  
    idPoints                                html  
    mmMirrorLocs                            html  
    plot                                    html  
    plotScaleSpace                          html  
    probeAnnotation-class                   html  
    samplePointMatrix-class                 html  
    sigSegments-class                       html  
    spmCollection-class                     html  
    write.table                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'KCsmart' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'KCsmart' as KCsmart_2.52.0.zip
* DONE (KCsmart)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'KCsmart' successfully unpacked and MD5 sums checked