Back to Multiple platform build/check report for BioC 3.14
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:35 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for GCSscore on tokay2


To the developers/maintainers of the GCSscore package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GCSscore.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 708/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GCSscore 1.8.0  (landing page)
Guy M. Harris
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/GCSscore
git_branch: RELEASE_3_14
git_last_commit: d7f279c
git_last_commit_date: 2021-10-26 12:55:52 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GCSscore
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GCSscore_1.8.0.tar.gz && rm -rf GCSscore.buildbin-libdir && mkdir GCSscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GCSscore.buildbin-libdir GCSscore_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GCSscore_1.8.0.zip && rm GCSscore_1.8.0.tar.gz GCSscore_1.8.0.zip
StartedAt: 2022-04-12 06:56:07 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:57:44 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 97.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GCSscore_1.8.0.tar.gz && rm -rf GCSscore.buildbin-libdir && mkdir GCSscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GCSscore.buildbin-libdir GCSscore_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GCSscore_1.8.0.zip && rm GCSscore_1.8.0.tar.gz GCSscore_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 10 4373k   10  461k    0     0   819k      0  0:00:05 --:--:--  0:00:05  819k
 47 4373k   47 2089k    0     0  1360k      0  0:00:03  0:00:01  0:00:02 1360k
100 4373k  100 4373k    0     0  1804k      0  0:00:02  0:00:02 --:--:-- 1805k

install for i386

* installing *source* package 'GCSscore' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GCSscore'
    finding HTML links ... done
    GCSscore                                html  
    calcSF                                  html  
    computeSscore                           html  
    get3primeIVTprobefileData               html  
    getClariomSprobefileData                html  
    getXTAprobefileData                     html  
    mismatch                                html  
    normalize                               html  
    rawScore                                html  
    zoneRQ                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GCSscore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GCSscore' as GCSscore_1.8.0.zip
* DONE (GCSscore)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GCSscore' successfully unpacked and MD5 sums checked