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This page was generated on 2022-04-13 12:07:37 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for AnnotationForge on machv2


To the developers/maintainers of the AnnotationForge package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnnotationForge.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 62/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationForge 1.36.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/AnnotationForge
git_branch: RELEASE_3_14
git_last_commit: 523b5f0
git_last_commit_date: 2021-10-26 12:03:32 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: AnnotationForge
Version: 1.36.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
StartedAt: 2022-04-12 04:39:32 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:44:03 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 271.5 seconds
RetCode: 0
Status:   OK  
PackageFile: AnnotationForge_1.36.0.tar.gz
PackageFileSize: 3.729 MiB

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
###
##############################################################################
##############################################################################


* checking for file ‘AnnotationForge/DESCRIPTION’ ... OK
* preparing ‘AnnotationForge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/GO.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/INPARANOID.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBICHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBIORG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOCHIPSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORGANISM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORTHOLOGY.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/ProbePkg-template/data’ is empty
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘AnnotationForge/inst/extdata/viableIDs.rda’
* building ‘AnnotationForge_1.36.0.tar.gz’