Back to Multiple platform build/check report for BioC 3.12
ABCDEFGHIJKLMNOPQRSTUV[W]XYZ

INSTALL report for webbioc on tokay1

This page was generated on 2021-05-06 12:34:11 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the webbioc package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1952/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
webbioc 1.62.0  (landing page)
Colin A. Smith
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/webbioc
Branch: RELEASE_3_12
Last Commit: d2a6ff9
Last Changed Date: 2020-10-27 10:23:07 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: webbioc
Version: 1.62.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/webbioc_1.62.0.tar.gz && rm -rf webbioc.buildbin-libdir && mkdir webbioc.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=webbioc.buildbin-libdir webbioc_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL webbioc_1.62.0.zip && rm webbioc_1.62.0.tar.gz webbioc_1.62.0.zip
StartedAt: 2021-05-05 17:28:40 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:29:23 -0400 (Wed, 05 May 2021)
EllapsedTime: 42.5 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/webbioc_1.62.0.tar.gz && rm -rf webbioc.buildbin-libdir && mkdir webbioc.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=webbioc.buildbin-libdir webbioc_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL webbioc_1.62.0.zip && rm webbioc_1.62.0.tar.gz webbioc_1.62.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 40996  100 40996    0     0  3047k      0 --:--:-- --:--:-- --:--:-- 3336k

install for i386

* installing *source* package 'webbioc' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12 
** help
*** installing help indices
  converting help for package 'webbioc'
    finding HTML links ... done
    installReps                             html  
    mt.wrapper                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'webbioc' ...
** testing if installed package can be loaded
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'webbioc' as webbioc_1.62.0.zip
* DONE (webbioc)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'webbioc' successfully unpacked and MD5 sums checked