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INSTALL report for survtype on tokay1

This page was generated on 2021-05-06 12:33:52 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the survtype package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1817/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
survtype 1.6.1  (landing page)
Dongmin Jung
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/survtype
Branch: RELEASE_3_12
Last Commit: 595b6bb
Last Changed Date: 2021-04-20 06:04:49 -0400 (Tue, 20 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: survtype
Version: 1.6.1
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/survtype_1.6.1.tar.gz && rm -rf survtype.buildbin-libdir && mkdir survtype.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=survtype.buildbin-libdir survtype_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL survtype_1.6.1.zip && rm survtype_1.6.1.tar.gz survtype_1.6.1.zip
StartedAt: 2021-05-05 19:09:05 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:10:03 -0400 (Wed, 05 May 2021)
EllapsedTime: 58.0 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/survtype_1.6.1.tar.gz && rm -rf survtype.buildbin-libdir && mkdir survtype.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=survtype.buildbin-libdir survtype_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL survtype_1.6.1.zip && rm survtype_1.6.1.tar.gz survtype_1.6.1.zip
###
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100  9679  100  9679    0     0   433k      0 --:--:-- --:--:-- --:--:--  450k

install for i386

* installing *source* package 'survtype' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'survtype'
    finding HTML links ... done
    Exprs.survtype                          html  
    MAF.survgroup                           html  
    Single.survgroup                        html  
    Surv.survtype                           html  
    gene.clust                              html  
    maf2matrix                              html  
    plot.survtype                           html  
    quantile_normalization                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'survtype' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'survtype' as survtype_1.6.1.zip
* DONE (survtype)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'survtype' successfully unpacked and MD5 sums checked