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### Running command:
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###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/rqubic_1.36.0.tar.gz && rm -rf rqubic.buildbin-libdir && mkdir rqubic.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rqubic.buildbin-libdir rqubic_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL rqubic_1.36.0.zip && rm rqubic_1.36.0.tar.gz rqubic_1.36.0.zip
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 75465  100 75465    0     0  3315k      0 --:--:-- --:--:-- --:--:-- 3509k

install for i386

* installing *source* package 'rqubic' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c bicluster.c -o bicluster.o
bicluster.c: In function 'seed_intersect_r':
bicluster.c:354:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
       if (flag=ss) (*m_cnt)++;
           ^~~~
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c discretize.c -o discretize.o
In file included from discretize.c:9:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c fib.c -o fib.o
In file included from fib.c:35:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c graph.c -o graph.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rqubic.c -o rqubic.o
In file included from rqubic.c:5:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o rqubic.dll tmp.def bicluster.o discretize.o fib.o graph.o rqubic.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/rqubic.buildbin-libdir/00LOCK-rqubic/00new/rqubic/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rqubic'
    finding HTML links ... done
    QUBICBiclusterSet-class                 html  
    finding level-2 HTML links ... done

    combineBiclusts-methods                 html  
    discretize                              html  
    eSetDimName                             html  
    fcFilter-methods                        html  
    fcFilter                                html  
    features-methods                        html  
    generateSeeds-methods                   html  
    parseQubicBlocks                        html  
    quBicluster                             html  
    readBiclusterResults                    html  
    rqubic-package                          html  
    writeQubicInputFile                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'rqubic' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c bicluster.c -o bicluster.o
bicluster.c: In function 'seed_intersect_r':
bicluster.c:354:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
       if (flag=ss) (*m_cnt)++;
           ^~~~
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c discretize.c -o discretize.o
In file included from discretize.c:9:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c fib.c -o fib.o
In file included from fib.c:35:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c graph.c -o graph.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rqubic.c -o rqubic.o
In file included from rqubic.c:5:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *MINCOL_ATT_NAME="minimumCol";
                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
 static const char *EDGELIST_ATT_NAME="edgelist";
                    ^~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o rqubic.dll tmp.def bicluster.o discretize.o fib.o graph.o rqubic.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/rqubic.buildbin-libdir/rqubic/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rqubic' as rqubic_1.36.0.zip
* DONE (rqubic)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'rqubic' successfully unpacked and MD5 sums checked