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BUILD BIN report for reb on tokay1

This page was generated on 2021-05-06 12:33:09 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the reb package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1484/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
reb 1.68.0  (landing page)
Karl J. Dykema
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/reb
Branch: RELEASE_3_12
Last Commit: 25e1ca7
Last Changed Date: 2020-10-27 10:26:42 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    ERROR  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: reb
Version: 1.68.0
Command: rm -rf reb.buildbin-libdir && mkdir reb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=reb.buildbin-libdir reb_1.68.0.tar.gz
StartedAt: 2021-05-06 09:54:04 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:54:42 -0400 (Thu, 06 May 2021)
EllapsedTime: 37.5 seconds
RetCode: 0
Status:   OK   
PackageFile: reb_1.68.0.zip
PackageFileSize: 766.2 KiB

Command output

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###
### Running command:
###
###   rm -rf reb.buildbin-libdir && mkdir reb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=reb.buildbin-libdir reb_1.68.0.tar.gz
###
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install for i386

* installing *source* package 'reb' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c movbin.c -o movbin.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o reb.dll tmp.def movbin.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/reb.buildbin-libdir/00LOCK-reb/00new/reb/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'reb'
    finding HTML links ... done
    Hs.arms                                 html  
    absMax                                  html  
    buildChromCytoband                      html  
    buildChromMap                           html  
    cset2band                               html  
    fromRevIsh                              html  
    isAbnormal                              html  
    mcr.eset                                html  
    movbin                                  html  
    movt                                    html  
    naMean                                  html  
    regmap                                  html  
    revish                                  html  
    rmAmbigMappings                         html  
    smoothByRegion                          html  
    summarizeByRegion                       html  
    tBinomTest                              html  
    writeGFF3                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'reb' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'reb' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'reb' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c movbin.c -o movbin.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o reb.dll tmp.def movbin.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/reb.buildbin-libdir/reb/libs/x64
** testing if installed package can be loaded
Warning: Package 'reb' is deprecated and will be removed from Bioconductor
  version 3.13
* MD5 sums
packaged installation of 'reb' as reb_1.68.0.zip
* DONE (reb)