Alexey Sergushichev
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/phantasus |
| Branch: RELEASE_3_12 |
| Last Commit: efcdf05 |
| Last Changed Date: 2020-10-27 11:33:27 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:44 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the phantasus package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1334/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| phantasus 1.10.0 (landing page) Alexey Sergushichev
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: phantasus |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/phantasus_1.10.0.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL phantasus_1.10.0.zip && rm phantasus_1.10.0.tar.gz phantasus_1.10.0.zip |
| StartedAt: 2021-05-05 18:43:33 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:45:36 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 123.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/phantasus_1.10.0.tar.gz && rm -rf phantasus.buildbin-libdir && mkdir phantasus.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phantasus.buildbin-libdir phantasus_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL phantasus_1.10.0.zip && rm phantasus_1.10.0.tar.gz phantasus_1.10.0.zip
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install for i386
* installing *source* package 'phantasus' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'phantasus'
finding HTML links ... done
adjustDataset html
annotationDBMeta html
calcPCA html
calculatedAnnotation html
checkGPLsFallback html
colMeansByGroups html
collapseDataset html
convertByAnnotationDB html
createES html
es html
fgseaExample html
generatePreloadedSession html
getArchs4Files html
getES html
getGDS html
getGSE html
gseaPlot html
limmaAnalysis html
loadFromARCHS4 html
loadGEO html
loadPreloaded html
performKmeans html
queryAnnotationDBMeta html
read.gct html
reparseCachedESs html
reproduceInR html
servePhantasus html
shinyGAMAnalysis html
subsetES html
write.gct html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'phantasus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phantasus' as phantasus_1.10.0.zip
* DONE (phantasus)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'phantasus' successfully unpacked and MD5 sums checked