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INSTALL report for mBPCR on tokay1

This page was generated on 2021-05-06 12:32:09 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the mBPCR package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1018/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mBPCR 1.44.0  (landing page)
P.M.V. Rancoita
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/mBPCR
Branch: RELEASE_3_12
Last Commit: d64dedf
Last Changed Date: 2020-10-27 10:36:15 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: mBPCR
Version: 1.44.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/mBPCR_1.44.0.tar.gz && rm -rf mBPCR.buildbin-libdir && mkdir mBPCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mBPCR.buildbin-libdir mBPCR_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL mBPCR_1.44.0.zip && rm mBPCR_1.44.0.tar.gz mBPCR_1.44.0.zip
StartedAt: 2021-05-05 18:54:17 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:55:37 -0400 (Wed, 05 May 2021)
EllapsedTime: 80.3 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/mBPCR_1.44.0.tar.gz && rm -rf mBPCR.buildbin-libdir && mkdir mBPCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mBPCR.buildbin-libdir mBPCR_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL mBPCR_1.44.0.zip && rm mBPCR_1.44.0.tar.gz mBPCR_1.44.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  451k  100  451k    0     0  18.5M      0 --:--:-- --:--:-- --:--:-- 19.1M

install for i386

* installing *source* package 'mBPCR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning message:
In .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
  converting help for package 'mBPCR'
    finding HTML links ... done
    centromere                              html  
    computeMBPCR                            html  
    estGlobParam                            html  
    estProfileWithMBPCR                     html  
    estProfileWithMBPCRforOligoSnpSet       html  
    importCNData                            html  
    jekoChr11Array250Knsp                   html  
    logAdd                                  html  
    mBPCR-internal                          html  
    plotEstProfile                          html  
    rec10k                                  html  
    writeEstProfile                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mBPCR' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'mBPCR' as mBPCR_1.44.0.zip
* DONE (mBPCR)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'mBPCR' successfully unpacked and MD5 sums checked