Zilu Zhou
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/iCNV |
| Branch: RELEASE_3_12 |
| Last Commit: ce1ecaf |
| Last Changed Date: 2020-10-27 11:33:11 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:48 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the iCNV package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 869/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| iCNV 1.10.0 (landing page) Zilu Zhou
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: iCNV |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/iCNV_1.10.0.tar.gz && rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL iCNV_1.10.0.zip && rm iCNV_1.10.0.tar.gz iCNV_1.10.0.zip |
| StartedAt: 2021-05-05 18:28:36 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:30:36 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 119.7 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/iCNV_1.10.0.tar.gz && rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL iCNV_1.10.0.zip && rm iCNV_1.10.0.tar.gz iCNV_1.10.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1207k 100 1207k 0 0 4246k 0 --:--:-- --:--:-- --:--:-- 4250k
install for i386
* installing *source* package 'iCNV' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible
** help
*** installing help indices
converting help for package 'iCNV'
finding HTML links ... done
bambaf_from_vcf html
bed_generator html
chr html
filenm html
get_array_input html
iCNV_detection html
icnv_output_to_gb html
icnv_res0 html
ngs_baf html
ngs_baf.chr html
ngs_baf.id html
ngs_baf.nm html
ngs_baf.pos html
ngs_plr html
ngs_plr.pos html
normObj html
output_list html
plotHMMscore html
plot_intensity html
plotindi html
projname html
qcObj html
sampname html
sampname_qc html
snp_baf html
snp_baf.pos html
snp_lrr html
snp_lrr.pos html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'iCNV' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iCNV' as iCNV_1.10.0.zip
* DONE (iCNV)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'iCNV' successfully unpacked and MD5 sums checked