VJ Carey
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/hmdbQuery |
| Branch: RELEASE_3_12 |
| Last Commit: 30801af |
| Last Changed Date: 2021-02-14 17:55:32 -0400 (Sun, 14 Feb 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:46 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the hmdbQuery package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 843/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| hmdbQuery 1.10.1 (landing page) VJ Carey
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: hmdbQuery |
| Version: 1.10.1 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/hmdbQuery_1.10.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.10.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.10.1.zip && rm hmdbQuery_1.10.1.tar.gz hmdbQuery_1.10.1.zip |
| StartedAt: 2021-05-05 16:57:52 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:58:24 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 32.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/hmdbQuery_1.10.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.10.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.10.1.zip && rm hmdbQuery_1.10.1.tar.gz hmdbQuery_1.10.1.zip
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install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'hmdbQuery/vignettes/hmdbQuery.Rmd' to 'hmdbQuery/README.md'
* installing *source* package 'hmdbQuery' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'hmdbQuery'
finding HTML links ... done
HmdbEntry-class html
HmdbEntry html
biospecimens-HmdbEntry-method html
diseases-HmdbEntry-method html
hmdb1 html
hmdb_disease html
hmdb_gene html
hmdb_omim html
hmdb_protein html
store-HmdbEntry-method html
tissues-HmdbEntry-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'hmdbQuery/vignettes/hmdbQuery.Rmd' to 'hmdbQuery/README.md'
* installing *source* package 'hmdbQuery' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'hmdbQuery' as hmdbQuery_1.10.1.zip
* DONE (hmdbQuery)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'hmdbQuery' successfully unpacked and MD5 sums checked