| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:31:24 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the gemini package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 678/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| gemini 1.4.0 (landing page) Sidharth Jain
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: gemini |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/gemini_1.4.0.tar.gz && rm -rf gemini.buildbin-libdir && mkdir gemini.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gemini.buildbin-libdir gemini_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL gemini_1.4.0.zip && rm gemini_1.4.0.tar.gz gemini_1.4.0.zip |
| StartedAt: 2021-05-05 19:10:13 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:11:07 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 53.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/gemini_1.4.0.tar.gz && rm -rf gemini.buildbin-libdir && mkdir gemini.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gemini.buildbin-libdir gemini_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL gemini_1.4.0.zip && rm gemini_1.4.0.tar.gz gemini_1.4.0.zip
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install for i386
* installing *source* package 'gemini' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'gemini'
finding HTML links ... done
Input html
Model html
Sgene2Pguides_hash html
Sguide2Pguides_hash html
compound html
counts html
dot-median_normalize html
gemini_boxplot html
gemini_calculate_lfc html
gemini_create_input html
gemini_inference html
gemini_initialize html
gemini_parallelization html
gemini_plot_mae html
gemini_prepare_input html
gemini_score html
guide.annotation html
initialize_s html
initialize_tau html
initialize_x html
initialize_y html
pipe html
sample.replicate.annotation html
update_mae html
update_s_pb html
update_tau_pb html
update_x_pb html
update_y_pb html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'gemini' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gemini' as gemini_1.4.0.zip
* DONE (gemini)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'gemini' successfully unpacked and MD5 sums checked