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BUILD BIN report for dexus on tokay1

This page was generated on 2021-05-06 12:30:55 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the dexus package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 471/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dexus 1.30.0  (landing page)
Guenter Klambauer
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/dexus
Branch: RELEASE_3_12
Last Commit: 6735357
Last Changed Date: 2020-10-27 10:49:40 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: dexus
Version: 1.30.0
Command: rm -rf dexus.buildbin-libdir && mkdir dexus.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dexus.buildbin-libdir dexus_1.30.0.tar.gz
StartedAt: 2021-05-06 08:54:56 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 08:55:12 -0400 (Thu, 06 May 2021)
EllapsedTime: 16.0 seconds
RetCode: 0
Status:   OK   
PackageFile: dexus_1.30.0.zip
PackageFileSize: 3.929 MiB

Command output

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### Running command:
###
###   rm -rf dexus.buildbin-libdir && mkdir dexus.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dexus.buildbin-libdir dexus_1.30.0.tar.gz
###
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install for i386

* installing *source* package 'dexus' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dexus.cpp -o dexus.o
dexus.cpp: In function 'SEXPREC* dexus_impl(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, int*, SEXP, SEXP, SEXP)':
dexus.cpp:193:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable]
  const double DEFAULT_R = 20; // R value used when re-setting clusters
               ^~~~~~~~~
dexus.cpp: In function 'SEXPREC* dexss_impl(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, int*, SEXP, SEXP, SEXP)':
dexus.cpp:575:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable]
  const double DEFAULT_R = 20; // R value used when re-setting clusters
               ^~~~~~~~~
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o dexus.dll tmp.def dexus.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/dexus.buildbin-libdir/00LOCK-dexus/00new/dexus/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'dexus'
    finding HTML links ... done
    DEXUSResult-class                       html  
    DEXUSResult-subset                      html  
    INI                                     html  
    INIThreshold-set                        html  
    accessors                               html  
    countsBottomly                          html  
    countsGilad                             html  
    countsLi                                html  
    countsMontgomery                        html  
    countsPickrell                          html  
    dexss                                   html  
    dexus                                   html  
    dexus.parallel                          html  
    getSizeNB                               html  
    normalizeData                           html  
    plot                                    html  
    sort                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'dexus' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dexus.cpp -o dexus.o
dexus.cpp: In function 'SEXPREC* dexus_impl(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, int*, SEXP, SEXP, SEXP)':
dexus.cpp:193:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable]
  const double DEFAULT_R = 20; // R value used when re-setting clusters
               ^~~~~~~~~
dexus.cpp: In function 'SEXPREC* dexss_impl(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, int*, SEXP, SEXP, SEXP)':
dexus.cpp:575:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable]
  const double DEFAULT_R = 20; // R value used when re-setting clusters
               ^~~~~~~~~
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o dexus.dll tmp.def dexus.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/dexus.buildbin-libdir/dexus/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'dexus' as dexus_1.30.0.zip
* DONE (dexus)