Ted Natoli
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/cmapR |
| Branch: RELEASE_3_12 |
| Last Commit: 5a9929a |
| Last Changed Date: 2020-12-09 16:42:16 -0400 (Wed, 09 Dec 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:23 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the cmapR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 329/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| cmapR 1.2.1 (landing page) Ted Natoli
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: cmapR |
| Version: 1.2.1 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/cmapR_1.2.1.tar.gz && rm -rf cmapR.buildbin-libdir && mkdir cmapR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cmapR.buildbin-libdir cmapR_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL cmapR_1.2.1.zip && rm cmapR_1.2.1.tar.gz cmapR_1.2.1.zip |
| StartedAt: 2021-05-05 17:50:49 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:51:48 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 58.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/cmapR_1.2.1.tar.gz && rm -rf cmapR.buildbin-libdir && mkdir cmapR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cmapR.buildbin-libdir cmapR_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL cmapR_1.2.1.zip && rm cmapR_1.2.1.tar.gz cmapR_1.2.1.zip
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install for i386
* installing *source* package 'cmapR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'cmapR'
finding HTML links ... done
GCT-class html
GCT html
align_matrices html
annotate_gct html
append_dim html
cdesc_char html
check_colnames html
check_dups html
distil html
ds html
extract_gct html
fix_datatypes html
gene_set html
ids html
is.wholenumber html
kd_gct html
lxb2mat html
mat html
melt_gct html
finding level-2 HTML links ... done
merge_gct html
merge_with_precedence html
meta html
na_pad_matrix html
parse_gctx html
parse_gmt html
parse_gmx html
parse_grp html
process_ids html
rank_gct html
read_gctx_ids html
read_gctx_meta html
robust_zscore html
subset_gct html
subset_to_ids html
threshold html
transpose_gct html
update_gctx html
write_gct html
write_gctx html
write_gctx_meta html
write_gmt html
write_grp html
write_tbl html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'cmapR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cmapR' as cmapR_1.2.1.zip
* DONE (cmapR)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'cmapR' successfully unpacked and MD5 sums checked