Thomas J. Hardcastle
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/clusterSeq |
| Branch: RELEASE_3_12 |
| Last Commit: f1e1602 |
| Last Changed Date: 2020-10-27 11:20:11 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:21 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the clusterSeq package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 324/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| clusterSeq 1.14.0 (landing page) Thomas J. Hardcastle
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: clusterSeq |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/clusterSeq_1.14.0.tar.gz && rm -rf clusterSeq.buildbin-libdir && mkdir clusterSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterSeq.buildbin-libdir clusterSeq_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL clusterSeq_1.14.0.zip && rm clusterSeq_1.14.0.tar.gz clusterSeq_1.14.0.zip |
| StartedAt: 2021-05-05 18:12:17 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:12:50 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 33.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/clusterSeq_1.14.0.tar.gz && rm -rf clusterSeq.buildbin-libdir && mkdir clusterSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterSeq.buildbin-libdir clusterSeq_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL clusterSeq_1.14.0.zip && rm clusterSeq_1.14.0.tar.gz clusterSeq_1.14.0.zip
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install for i386
* installing *source* package 'clusterSeq' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'clusterSeq'
finding HTML links ... done
associatePosteriors html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/associatePosteriors.Rd:19: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/associatePosteriors.Rd:33: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
cD.ratThymus-data html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/cD.ratThymus-data.Rd:9: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/cD.ratThymus-data.Rd:19: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/cD.ratThymus-data.Rd:17: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
clusterSeq-package html
kCluster html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/kCluster.Rd:20: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaK6xj4/R.INSTALL1538597c49d0/clusterSeq/man/kCluster.Rd:70: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
makeClusters html
makeClustersFF html
plotCluster html
ratThymus-data html
wallace html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'clusterSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clusterSeq' as clusterSeq_1.14.0.zip
* DONE (clusterSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'clusterSeq' successfully unpacked and MD5 sums checked