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INSTALL report for XCIR on tokay1

This page was generated on 2021-05-06 12:34:12 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the XCIR package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1959/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
XCIR 1.4.0  (landing page)
Renan Sauteraud
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/XCIR
Branch: RELEASE_3_12
Last Commit: 38d9b27
Last Changed Date: 2020-10-27 11:46:42 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: XCIR
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/XCIR_1.4.0.tar.gz && rm -rf XCIR.buildbin-libdir && mkdir XCIR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XCIR.buildbin-libdir XCIR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL XCIR_1.4.0.zip && rm XCIR_1.4.0.tar.gz XCIR_1.4.0.zip
StartedAt: 2021-05-05 19:07:28 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:09:27 -0400 (Wed, 05 May 2021)
EllapsedTime: 119.7 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/XCIR_1.4.0.tar.gz && rm -rf XCIR.buildbin-libdir && mkdir XCIR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XCIR.buildbin-libdir XCIR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL XCIR_1.4.0.zip && rm XCIR_1.4.0.tar.gz XCIR_1.4.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  466k  100  466k    0     0  19.1M      0 --:--:-- --:--:-- --:--:-- 19.7M

install for i386

* installing *source* package 'XCIR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'XCIR'
    finding HTML links ... done
    BetaConversion                          html  
    XCIR-package                            html  
    addAnno                                 html  
    annotateX                               html  
    betaBinomXI                             html  
    consensusXCI                            html  
    getGenicDP                              html  
    getXCIstate                             html  
    mart_genes                              html  
    plotBBCellFrac                          html  
    plotQC                                  html  
    readRNASNPs                             html  
    readVCF4                                html  
    readXCI                                 html  
    sample_clean                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'XCIR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'XCIR' as XCIR_1.4.0.zip
* DONE (XCIR)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'XCIR' successfully unpacked and MD5 sums checked