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BUILD BIN report for SCOPE on tokay1

This page was generated on 2021-05-06 12:33:29 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the SCOPE package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1652/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SCOPE 1.2.0  (landing page)
Rujin Wang
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/SCOPE
Branch: RELEASE_3_12
Last Commit: b63bbf0
Last Changed Date: 2020-10-27 11:53:33 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: SCOPE
Version: 1.2.0
Command: rm -rf SCOPE.buildbin-libdir && mkdir SCOPE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCOPE.buildbin-libdir SCOPE_1.2.0.tar.gz
StartedAt: 2021-05-06 10:04:17 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 10:05:00 -0400 (Thu, 06 May 2021)
EllapsedTime: 43.7 seconds
RetCode: 0
Status:   OK   
PackageFile: SCOPE_1.2.0.zip
PackageFileSize: 632.2 KiB

Command output

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### Running command:
###
###   rm -rf SCOPE.buildbin-libdir && mkdir SCOPE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCOPE.buildbin-libdir SCOPE_1.2.0.tar.gz
###
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install for i386

* installing *source* package 'SCOPE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** help
*** installing help indices
  converting help for package 'SCOPE'
    finding HTML links ... done
    QCmetric.scopeDemo                      html  
    Y_sim                                   html  
    coverageObj.scopeDemo                   html  
    get_bam_bed                             html  
    get_coverage_scDNA                      html  
    get_gc                                  html  
    get_gini                                html  
    get_mapp                                html  
    get_samp_QC                             html  
    iCN_sim                                 html  
    initialize_ploidy                       html  
    initialize_ploidy_group                 html  
    normObj.scopeDemo                       html  
    normalize_codex2_ns_noK                 html  
    normalize_scope                         html  
    normalize_scope_foreach                 html  
    normalize_scope_group                   html  
    perform_qc                              html  
    plot_EM_fit                             html  
    plot_iCN                                html  
    ref.scopeDemo                           html  
    ref_sim                                 html  
    segment_CBScs                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SCOPE' ...
** testing if installed package can be loaded
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
* MD5 sums
packaged installation of 'SCOPE' as SCOPE_1.2.0.zip
* DONE (SCOPE)