Lars Kaderali
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/RNAither |
| Branch: RELEASE_3_12 |
| Last Commit: c2ad330 |
| Last Changed Date: 2020-10-27 10:34:29 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:18 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the RNAither package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1548/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| RNAither 2.38.0 (landing page) Lars Kaderali
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: RNAither |
| Version: 2.38.0 |
| Command: rm -rf RNAither.buildbin-libdir && mkdir RNAither.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNAither.buildbin-libdir RNAither_2.38.0.tar.gz |
| StartedAt: 2021-05-06 09:57:57 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 09:58:48 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 50.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: RNAither_2.38.0.zip |
| PackageFileSize: 1.499 MiB |
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### Running command:
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### rm -rf RNAither.buildbin-libdir && mkdir RNAither.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNAither.buildbin-libdir RNAither_2.38.0.tar.gz
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install for i386
* installing *source* package 'RNAither' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
Warning message:
Package 'prada' is deprecated and will be removed from Bioconductor
version 3.13
** help
*** installing help indices
converting help for package 'RNAither'
finding HTML links ... done
BScore html
DRQualControl html
LiWongRank html
MannWhitney html
RNAither-package html
RankProduct html
SNRQualControl html
Ttest html
ZPRIMEQualControl html
ZScore html
ZScorePerScreen html
ZScorePlot html
ZScorePlotTwo html
channelPlot html
closestToZero html
compareHits html
compareReplicaPlates html
compareReplicateSD html
compareReplicateSDPerScreen html
compareReplicates html
controlDensity html
controlDensityPerPlate html
controlDensityPerScreen html
controlNorm html
createSubset html
dataset html
datasetDrosophila html
discardLabtek html
discardWells html
divNorm html
divideChannels html
eraseDataSetColumn html
findReplicates html
furthestFromZero html
generateDatasetFile html
generateRepMatNoFilter html
generateReplicateMat html
gseaAnalysis html
header html
headerDrosophila html
hitselectionPval html
hitselectionZscore html
hitselectionZscorePval html
incorporatepValVec html
indexSubset html
joinDatasetFiles html
joinDatasets html
lowessNorm html
mainAnalysis html
makeBoxplot4PlateType html
makeBoxplotControls html
makeBoxplotControlsPerPlate html
makeBoxplotControlsPerScreen html
makeBoxplotPerPlate html
makeBoxplotPerScreen html
multTestAdjust html
numCellQualControl html
orderGeneIDs html
pValVec1 html
pValVec2 html
percCellQualControl html
plotBar html
plotControlHisto html
plotControlHistoPerplate html
plotControlHistoPerscreen html
plotHisto html
plotHistoPerplate html
plotHistoPerscreen html
plotQQ html
plotQQperplate html
plotQQperscreen html
quantileNormalization html
replicatesCV html
replicatesSpearmancor html
rms html
rnaither html
saveDataset html
saveOldIntensityColumns html
savepValVec html
scoredDataset1 html
scoredDataset2 html
spatialDistrib html
spatialDistribHits html
subtractBackground html
sumChannels html
summarizeReps html
summarizeRepsNoFiltering html
trim html
varAdjust html
vennDiag html
volcanoPlot html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
Warning: Package 'prada' is deprecated and will be removed from Bioconductor
version 3.13
** testing if installed package can be loaded from final location
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
Warning: Package 'prada' is deprecated and will be removed from Bioconductor
version 3.13
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RNAither' ...
** testing if installed package can be loaded
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
Warning: Package 'prada' is deprecated and will be removed from Bioconductor
version 3.13
* MD5 sums
packaged installation of 'RNAither' as RNAither_2.38.0.zip
* DONE (RNAither)