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BUILD BIN report for PGSEA on merida1

This page was generated on 2021-05-06 12:36:06 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the PGSEA package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1333/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PGSEA 1.64.0  (landing page)
Karl Dykema
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/PGSEA
Branch: RELEASE_3_12
Last Commit: 0f5b621
Last Changed Date: 2020-10-27 10:30:45 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    ERROR  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: PGSEA
Version: 1.64.0
Command: rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PGSEA_1.64.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PGSEA.buildbin-libdir
StartedAt: 2021-05-06 09:32:48 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:33:50 -0400 (Thu, 06 May 2021)
EllapsedTime: 62.2 seconds
RetCode: 0
Status:   OK  
PackageFile: PGSEA_1.64.0.tgz
PackageFileSize: 1.219 MiB

Command output

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### Running command:
###
###   rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PGSEA_1.64.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PGSEA.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=PGSEA.buildbin-libdir PGSEA_1.64.0.tar.gz'
>>>>>>> 

* installing *source* package ‘PGSEA’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
Warning: Package 'PGSEA' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
Warning: Package 'PGSEA' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package keeps a record of temporary installation path
* DONE (PGSEA)