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INSTALL report for NarrowPeaks on tokay1

This page was generated on 2021-05-06 12:32:26 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the NarrowPeaks package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1201/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NarrowPeaks 1.34.0  (landing page)
Pedro Madrigal
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/NarrowPeaks
Branch: RELEASE_3_12
Last Commit: ef30d80
Last Changed Date: 2020-10-27 10:44:55 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    ERROR  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: NarrowPeaks
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/NarrowPeaks_1.34.0.tar.gz && rm -rf NarrowPeaks.buildbin-libdir && mkdir NarrowPeaks.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NarrowPeaks.buildbin-libdir NarrowPeaks_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL NarrowPeaks_1.34.0.zip && rm NarrowPeaks_1.34.0.tar.gz NarrowPeaks_1.34.0.zip
StartedAt: 2021-05-05 19:16:06 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:16:32 -0400 (Wed, 05 May 2021)
EllapsedTime: 25.7 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/NarrowPeaks_1.34.0.tar.gz && rm -rf NarrowPeaks.buildbin-libdir && mkdir NarrowPeaks.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NarrowPeaks.buildbin-libdir NarrowPeaks_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL NarrowPeaks_1.34.0.zip && rm NarrowPeaks_1.34.0.tar.gz NarrowPeaks_1.34.0.zip
###
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100  114k  100  114k    0     0  6016k      0 --:--:-- --:--:-- --:--:-- 6386k

install for i386

* installing *source* package 'NarrowPeaks' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c wig2CSARScore.c -o wig2CSARScore.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c wig2CSARScore_R_wrapper.c -o wig2CSARScore_R_wrapper.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o NarrowPeaks.dll tmp.def wig2CSARScore.o wig2CSARScore_R_wrapper.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/NarrowPeaks.buildbin-libdir/00LOCK-NarrowPeaks/00new/NarrowPeaks/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NarrowPeaks'
    finding HTML links ... done
    NarrowPeaks-internal                    html  
    NarrowPeaks-package                     html  
    narrowpeaks                             html  
    narrowpeaksDiff                         html  
    wig2CSARScore                           html  
    wigfile_test                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'NarrowPeaks' is deprecated and will be removed from
  Bioconductor version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'NarrowPeaks' is deprecated and will be removed from
  Bioconductor version 3.13
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'NarrowPeaks' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c wig2CSARScore.c -o wig2CSARScore.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c wig2CSARScore_R_wrapper.c -o wig2CSARScore_R_wrapper.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o NarrowPeaks.dll tmp.def wig2CSARScore.o wig2CSARScore_R_wrapper.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/NarrowPeaks.buildbin-libdir/NarrowPeaks/libs/x64
** testing if installed package can be loaded
Warning: Package 'NarrowPeaks' is deprecated and will be removed from
  Bioconductor version 3.13
* MD5 sums
packaged installation of 'NarrowPeaks' as NarrowPeaks_1.34.0.zip
* DONE (NarrowPeaks)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'NarrowPeaks' successfully unpacked and MD5 sums checked