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BUILD BIN report for MsCoreUtils on tokay1

This page was generated on 2021-05-06 12:32:21 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the MsCoreUtils package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1153/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MsCoreUtils 1.2.0  (landing page)
RforMassSpectrometry Package Maintainer
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/MsCoreUtils
Branch: RELEASE_3_12
Last Commit: 963c37c
Last Changed Date: 2020-10-27 11:55:50 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: MsCoreUtils
Version: 1.2.0
Command: rm -rf MsCoreUtils.buildbin-libdir && mkdir MsCoreUtils.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MsCoreUtils.buildbin-libdir MsCoreUtils_1.2.0.tar.gz
StartedAt: 2021-05-06 09:34:53 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:35:11 -0400 (Thu, 06 May 2021)
EllapsedTime: 17.8 seconds
RetCode: 0
Status:   OK   
PackageFile: MsCoreUtils_1.2.0.zip
PackageFileSize: 490.2 KiB

Command output

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### Running command:
###
###   rm -rf MsCoreUtils.buildbin-libdir && mkdir MsCoreUtils.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MsCoreUtils.buildbin-libdir MsCoreUtils_1.2.0.tar.gz
###
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install for i386

* installing *source* package 'MsCoreUtils' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c closest.c -o closest.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c impNeighbourAvg.c -o impNeighbourAvg.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c join.c -o join.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c localMaxima.c -o localMaxima.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o MsCoreUtils.dll tmp.def closest.o impNeighbourAvg.o init.o join.o localMaxima.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/MsCoreUtils.buildbin-libdir/00LOCK-MsCoreUtils/00new/MsCoreUtils/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MsCoreUtils'
    finding HTML links ... done
    aggregate_by_vector                     html  
    binning                                 html  
    check                                   html  
    coerce                                  html  
    colCounts                               html  
    distance                                html  
    group                                   html  
    i2index                                 html  
    imputation                              html  
    localMaxima                             html  
    matching                                html  
    medianPolish                            html  
    noise                                   html  
    normalize                               html  
    peakRegionMask                          html  
    ppm                                     html  
    range                                   html  
    rbindFill                               html  
    refineCentroids                         html  
    rla                                     html  
    robustSummary                           html  
    smooth                                  html  
    validation                              html  
    valleys                                 html  
    vapply                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MsCoreUtils' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c closest.c -o closest.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c impNeighbourAvg.c -o impNeighbourAvg.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c join.c -o join.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c localMaxima.c -o localMaxima.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o MsCoreUtils.dll tmp.def closest.o impNeighbourAvg.o init.o join.o localMaxima.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/MsCoreUtils.buildbin-libdir/MsCoreUtils/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MsCoreUtils' as MsCoreUtils_1.2.0.zip
* DONE (MsCoreUtils)