Mateusz Staniak
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/MSstatsConvert |
| Branch: RELEASE_3_12 |
| Last Commit: 90d207a |
| Last Changed Date: 2020-10-27 12:04:14 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:23 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the MSstatsConvert package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1166/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MSstatsConvert 1.0.0 (landing page) Mateusz Staniak
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: MSstatsConvert |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/MSstatsConvert_1.0.0.tar.gz && rm -rf MSstatsConvert.buildbin-libdir && mkdir MSstatsConvert.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstatsConvert.buildbin-libdir MSstatsConvert_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL MSstatsConvert_1.0.0.zip && rm MSstatsConvert_1.0.0.tar.gz MSstatsConvert_1.0.0.zip |
| StartedAt: 2021-05-05 16:39:22 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:40:31 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 68.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/MSstatsConvert_1.0.0.tar.gz && rm -rf MSstatsConvert.buildbin-libdir && mkdir MSstatsConvert.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstatsConvert.buildbin-libdir MSstatsConvert_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL MSstatsConvert_1.0.0.zip && rm MSstatsConvert_1.0.0.tar.gz MSstatsConvert_1.0.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
1 529k 1 5597 0 0 105k 0 0:00:05 --:--:-- 0:00:05 105k
100 529k 100 529k 0 0 9207k 0 --:--:-- --:--:-- --:--:-- 9286k
install for i386
* installing *source* package 'MSstatsConvert' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MSstatsConvert'
finding HTML links ... done
MSstatsBalancedDesign html
MSstatsClean html
MSstatsConvert html
MSstatsImport html
MSstatsInputFiles html
MSstatsLogsSettings html
MSstatsMakeAnnotation html
MSstatsPreprocess html
MSstatsSaveSessionInfo html
dot-MSstatsFormat html
dot-addFractions html
dot-adjustIntensities html
dot-aggregatePSMstoPeptideIons html
dot-checkAnnotation html
dot-checkDDA html
dot-checkDuplicatedMeasurements html
dot-checkMSstatsParams html
dot-checkMultiRun html
dot-checkOverlappedFeatures html
dot-cleanByFeature html
dot-cleanRawDIAUmpire html
dot-cleanRawMaxQuant html
dot-cleanRawOpenMS html
dot-cleanRawOpenSWATH html
dot-cleanRawPD html
dot-cleanRawPDMSstats html
dot-cleanRawPDTMT html
dot-cleanRawProgenesis html
dot-cleanRawSkyline html
dot-cleanRawSpectroMineTMT html
dot-cleanRawSpectronaut html
dot-countCommonFeatures html
dot-fillValues html
dot-filterByPattern html
dot-filterByScore html
dot-filterExact html
dot-filterFewMeasurements html
dot-filterManyColumns html
dot-filterOverlapped html
dot-findAvailable html
dot-fixColumnTypes html
dot-fixMissingValues html
dot-getChannelColumns html
dot-getCorrectFraction html
dot-getDataTable html
dot-getFullDesign html
dot-getMissingRunsPerFeature html
dot-getOverlappingFeatures html
dot-handleFiltering html
dot-handleFractions html
dot-handleFractionsLF html
dot-handleFractionsTMT html
dot-handleIsotopicPeaks html
dot-handleSharedPeptides html
dot-handleSingleFeaturePerProtein html
dot-logConverterOptions html
dot-logSuccess html
dot-makeBalancedDesign html
dot-makeExactFilterMessage html
dot-makeScoreFilterMessage html
dot-mergeAnnotation html
dot-nullAppender html
dot-onLoad html
dot-removeOverlappingFeatures html
dot-removeSharedPeptides html
dot-selectMSstatsColumns html
dot-standardizeColnames html
dot-summarizeMultipleMeasurements html
dot-summarizeMultiplePSMs html
getDataType html
getInputFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'MSstatsConvert' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSstatsConvert' as MSstatsConvert_1.0.0.zip
* DONE (MSstatsConvert)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'MSstatsConvert' successfully unpacked and MD5 sums checked