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INSTALL report for HumanTranscriptomeCompendium on tokay1

This page was generated on 2021-05-06 12:31:47 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the HumanTranscriptomeCompendium package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 852/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HumanTranscriptomeCompendium 1.6.0  (landing page)
VJ Carey
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/HumanTranscriptomeCompendium
Branch: RELEASE_3_12
Last Commit: 36303f1
Last Changed Date: 2020-10-27 11:45:21 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: HumanTranscriptomeCompendium
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/HumanTranscriptomeCompendium_1.6.0.tar.gz && rm -rf HumanTranscriptomeCompendium.buildbin-libdir && mkdir HumanTranscriptomeCompendium.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HumanTranscriptomeCompendium.buildbin-libdir HumanTranscriptomeCompendium_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL HumanTranscriptomeCompendium_1.6.0.zip && rm HumanTranscriptomeCompendium_1.6.0.tar.gz HumanTranscriptomeCompendium_1.6.0.zip
StartedAt: 2021-05-05 17:43:03 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:43:53 -0400 (Wed, 05 May 2021)
EllapsedTime: 50.1 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/HumanTranscriptomeCompendium_1.6.0.tar.gz && rm -rf HumanTranscriptomeCompendium.buildbin-libdir && mkdir HumanTranscriptomeCompendium.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HumanTranscriptomeCompendium.buildbin-libdir HumanTranscriptomeCompendium_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL HumanTranscriptomeCompendium_1.6.0.zip && rm HumanTranscriptomeCompendium_1.6.0.tar.gz HumanTranscriptomeCompendium_1.6.0.zip
###
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100 2159k  100 2159k    0     0  34.6M      0 --:--:-- --:--:-- --:--:-- 35.1M

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md'
* installing *source* package 'HumanTranscriptomeCompendium' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'HumanTranscriptomeCompendium'
    finding HTML links ... done
    HumanTranscriptomeCompendium.colnames   html  
    addRD                                   html  
    ca43k                                   html  
    get_ds4841                              html  
    htx_app                                 html  
    htx_load                                html  
    htx_query_by_study_accession            html  
    htx_query_by_text                       html  
    load_bigrnaFiles                        html  
    load_experTable                         html  
    load_studTable                          html  
    path_doc4842                            html  
    procExpToGene                           html  
    tx2gene_gencode27                       html  
    uniqueAcc_120518                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md'
* installing *source* package 'HumanTranscriptomeCompendium' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HumanTranscriptomeCompendium' as HumanTranscriptomeCompendium_1.6.0.zip
* DONE (HumanTranscriptomeCompendium)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'HumanTranscriptomeCompendium' successfully unpacked and MD5 sums checked