Back to Multiple platform build/check report for BioC 3.12
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

BUILD report for ENVISIONQuery on merida1

This page was generated on 2021-05-06 12:34:55 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the ENVISIONQuery package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 554/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ENVISIONQuery 1.38.0  (landing page)
Alex Lisovich , Roger Day
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/ENVISIONQuery
Branch: RELEASE_3_12
Last Commit: ff2bb74
Last Changed Date: 2020-10-27 10:40:44 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: ENVISIONQuery
Version: 1.38.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ENVISIONQuery
StartedAt: 2021-05-05 19:20:19 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:20:27 -0400 (Wed, 05 May 2021)
EllapsedTime: 8.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ENVISIONQuery
###
##############################################################################
##############################################################################


* checking for file ‘ENVISIONQuery/DESCRIPTION’ ... OK
* preparing ‘ENVISIONQuery’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ENVISIONQuery.Rnw’ using Sweave
Loading required package: rJava
Loading required package: XML
Warning in getService("ID Conversion") :
  ENVISIONQuery: Invalid service name
Warning in getService("Reactome") : ENVISIONQuery: Invalid service name

Error: processing vignette 'ENVISIONQuery.Rnw' failed with diagnostics:
 chunk 1 (label = chunk1) 
Error in if (!(toolName %in% toolNames)) { : argument is of length zero

--- failed re-building ‘ENVISIONQuery.Rnw’

SUMMARY: processing the following file failed:
  ‘ENVISIONQuery.Rnw’

Error: Vignette re-building failed.
Execution halted