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INSTALL report for DMRcate on tokay1

This page was generated on 2021-05-06 12:30:58 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the DMRcate package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 494/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMRcate 2.4.1  (landing page)
Tim Peters
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/DMRcate
Branch: RELEASE_3_12
Last Commit: bc6242a
Last Changed Date: 2021-01-13 23:09:44 -0400 (Wed, 13 Jan 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: DMRcate
Version: 2.4.1
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMRcate_2.4.1.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.4.1.zip && rm DMRcate_2.4.1.tar.gz DMRcate_2.4.1.zip
StartedAt: 2021-05-05 19:10:31 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:12:04 -0400 (Wed, 05 May 2021)
EllapsedTime: 92.6 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMRcate_2.4.1.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.4.1.zip && rm DMRcate_2.4.1.tar.gz DMRcate_2.4.1.zip
###
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100 63827  100 63827    0     0  2482k      0 --:--:-- --:--:-- --:--:-- 2597k

install for i386

* installing *source* package 'DMRcate' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** help
*** installing help indices
  converting help for package 'DMRcate'
    finding HTML links ... done
    CpGannotated-class                      html  
    DMR.plot                                html  
    DMRcate-internal                        html  
    DMRcate-package                         html  
    DMResults-class                         html  
    changeFDR                               html  
    cpg.annotate                            html  
    dmrcate                                 html  
    extractRanges                           html  
    rmSNPandCH                              html  
    sequencing.annotate                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DMRcate' ...
** testing if installed package can be loaded
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
* MD5 sums
packaged installation of 'DMRcate' as DMRcate_2.4.1.zip
* DONE (DMRcate)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'DMRcate' successfully unpacked and MD5 sums checked