Farhad Shokoohi
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/DMCHMM |
| Branch: RELEASE_3_12 |
| Last Commit: c44e65d |
| Last Changed Date: 2020-10-27 11:27:00 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:58 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the DMCHMM package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 492/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DMCHMM 1.12.0 (landing page) Farhad Shokoohi
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: DMCHMM |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMCHMM_1.12.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.12.0.zip && rm DMCHMM_1.12.0.tar.gz DMCHMM_1.12.0.zip |
| StartedAt: 2021-05-05 18:03:08 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:03:56 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 48.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMCHMM_1.12.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.12.0.zip && rm DMCHMM_1.12.0.tar.gz DMCHMM_1.12.0.zip
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install for i386
* installing *source* package 'DMCHMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** help
*** installing help indices
converting help for package 'DMCHMM'
finding HTML links ... done
BSDMCs-class html
BSData-class html
finding level-2 HTML links ... done
DMCHMM-package html
cBSDMCs-method html
cBSData-method html
combine-method html
data html
findDMCs-method html
manhattanDMCs-method html
methHMEM-method html
methHMMCMC-method html
methLevels-method html
methReads-method html
methStates-method html
methVars-method html
params html
qqDMCs-method html
readBismark-method html
totalReads-method html
writeBED-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DMCHMM' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
* MD5 sums
packaged installation of 'DMCHMM' as DMCHMM_1.12.0.zip
* DONE (DMCHMM)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'DMCHMM' successfully unpacked and MD5 sums checked