Back to Multiple platform build/check report for BioC 3.12
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for CRISPRseek on tokay1

This page was generated on 2021-05-06 12:30:31 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the CRISPRseek package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 395/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CRISPRseek 1.30.1  (landing page)
Lihua Julie Zhu
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/CRISPRseek
Branch: RELEASE_3_12
Last Commit: 3b0270d
Last Changed Date: 2021-01-11 15:59:45 -0400 (Mon, 11 Jan 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: CRISPRseek
Version: 1.30.1
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CRISPRseek_1.30.1.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.30.1.zip && rm CRISPRseek_1.30.1.tar.gz CRISPRseek_1.30.1.zip
StartedAt: 2021-05-05 18:04:28 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:06:08 -0400 (Wed, 05 May 2021)
EllapsedTime: 100.0 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CRISPRseek_1.30.1.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.30.1.zip && rm CRISPRseek_1.30.1.tar.gz CRISPRseek_1.30.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 8243k  100 8243k    0     0  51.4M      0 --:--:-- --:--:-- --:--:-- 51.9M

install for i386

* installing *source* package 'CRISPRseek' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CRISPRseek'
    finding HTML links ... done
    CRISPRseek-package                      html  
    annotateOffTargets                      html  
    buildFeatureVectorForScoring            html  
    calculategRNAEfficiency                 html  
    compare2Sequences                       html  
    filterOffTarget                         html  
    filtergRNA                              html  
    findgRNAs                               html  
    getOfftargetScore                       html  
    isPatternUnique                         html  
    offTargetAnalysis                       html  
    offTargetAnalysisWithoutBSgenome        html  
    predictRelativeFreqIndels               html  
    searchHits                              html  
    searchHits2                             html  
    translatePattern                        html  
    uniqueREs                               html  
    writeHits                               html  
    writeHits2                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CRISPRseek' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CRISPRseek' as CRISPRseek_1.30.1.zip
* DONE (CRISPRseek)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'CRISPRseek' successfully unpacked and MD5 sums checked