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BUILD BIN report for cicero on tokay2

This page was generated on 2020-10-17 11:56:17 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE cicero PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 299/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cicero 1.6.2
Hannah Pliner
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/cicero
Branch: RELEASE_3_11
Last Commit: 4b4bffc
Last Changed Date: 2020-08-30 10:22:51 -0400 (Sun, 30 Aug 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: cicero
Version: 1.6.2
Command: rm -rf cicero.buildbin-libdir && mkdir cicero.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cicero.buildbin-libdir cicero_1.6.2.tar.gz
StartedAt: 2020-10-17 10:06:44 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 10:08:48 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 124.0 seconds
RetCode: 0
Status:  OK  
PackageFile: cicero_1.6.2.zip
PackageFileSize: 1.312 MiB

Command output

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### Running command:
###
###   rm -rf cicero.buildbin-libdir && mkdir cicero.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cicero.buildbin-libdir cicero_1.6.2.tar.gz
###
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install for i386

* installing *source* package 'cicero' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cicero'
    finding HTML links ... done
    aggregate_by_cell_bin                   html  
    aggregate_nearby_peaks                  html  
    annotate_cds_by_site                    html  
    assemble_connections                    html  
    build_gene_activity_matrix              html  
    cell_data                               html  
    cicero-package                          html  
    cicero_data                             html  
    compare_connections                     html  
    df_for_coords                           html  
    estimate_distance_parameter             html  
    find_overlapping_ccans                  html  
    find_overlapping_coordinates            html  
    gene_annotation_sample                  html  
    generate_ccans                          html  
    generate_cicero_models                  html  
    human.hg19.genome                       html  
    make_atac_cds                           html  
    make_cicero_cds                         html  
    make_sparse_matrix                      html  
    normalize_gene_activities               html  
    plot_accessibility_in_pseudotime        html  
    plot_connections                        html  
    ranges_for_coords                       html  
    run_cicero                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cicero' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cicero' as cicero_1.6.2.zip
* DONE (cicero)