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INSTALL report for PrecisionTrialDrawer on tokay2

This page was generated on 2020-10-17 11:57:27 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE PrecisionTrialDrawer PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1344/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PrecisionTrialDrawer 1.4.0
Giorgio Melloni
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/PrecisionTrialDrawer
Branch: RELEASE_3_11
Last Commit: 7ded9c6
Last Changed Date: 2020-04-27 15:22:04 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PrecisionTrialDrawer
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PrecisionTrialDrawer_1.4.0.tar.gz && rm -rf PrecisionTrialDrawer.buildbin-libdir && mkdir PrecisionTrialDrawer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PrecisionTrialDrawer.buildbin-libdir PrecisionTrialDrawer_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PrecisionTrialDrawer_1.4.0.zip && rm PrecisionTrialDrawer_1.4.0.tar.gz PrecisionTrialDrawer_1.4.0.zip
StartedAt: 2020-10-16 18:52:33 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:54:11 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 97.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PrecisionTrialDrawer_1.4.0.tar.gz && rm -rf PrecisionTrialDrawer.buildbin-libdir && mkdir PrecisionTrialDrawer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PrecisionTrialDrawer.buildbin-libdir PrecisionTrialDrawer_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PrecisionTrialDrawer_1.4.0.zip && rm PrecisionTrialDrawer_1.4.0.tar.gz PrecisionTrialDrawer_1.4.0.zip
###
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100  380k  100  380k    0     0  5520k      0 --:--:-- --:--:-- --:--:-- 6045k

install for i386

* installing *source* package 'PrecisionTrialDrawer' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis'
** help
*** installing help indices
  converting help for package 'PrecisionTrialDrawer'
    finding HTML links ... done
    CancerPanel-class                       html  
    PrecisionTrialDrawer-package            html  
    appendRepo                              html  
    coocMutexPlot                           html  
    coveragePlot                            html  
    coverageStackPlot                       html  
    cpArguments                             html  
    cpData                                  html  
    cpDataSubset                            html  
    cpDesign                                html  
    cpFreq                                  html  
    cpObj                                   html  
    cpObj2                                  html  
    dataExtractor                           html  
    filterFusions                           html  
    filterMutations                         html  
    getAlterations                          html  
    newCancerPanel                          html  
    panelDesigner                           html  
    panelOptimizer                          html  
    panelexample                            html  
    propPowerSampleSize                     html  
    saturationPlot                          html  
    showCancerStudy                         html  
    showTumorType                           html  
    subsetAlterations                       html  
    survPowerSampleSize                     html  
    survPowerSampleSize1Arm                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis'
** testing if installed package can be loaded from final location
Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PrecisionTrialDrawer' ...
** testing if installed package can be loaded
Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis'
* MD5 sums
packaged installation of 'PrecisionTrialDrawer' as PrecisionTrialDrawer_1.4.0.zip
* DONE (PrecisionTrialDrawer)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'PrecisionTrialDrawer' successfully unpacked and MD5 sums checked