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Package 315/467HostnameOS / ArchBUILDCHECKBUILD BIN
OLIN 1.30.0
Matthias Futschik
Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/OLIN
Last Changed Rev: 54808 / Revision: 59457
Last Changed Date: 2011-04-13 18:03:42 -0700 (Wed, 13 Apr 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: OLIN
Version: 1.30.0
Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OLIN_1.30.0.tar.gz
StartedAt: 2011-10-20 16:18:42 -0700 (Thu, 20 Oct 2011)
EndedAt: 2011-10-20 16:21:03 -0700 (Thu, 20 Oct 2011)
EllapsedTime: 141.3 seconds
RetCode: 0
Status:  OK 
CheckDir: OLIN.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.8-bioc/meat/OLIN.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'OLIN/DESCRIPTION' ... OK
* this is package 'OLIN' version '1.30.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OLIN' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    doc   5.6Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under inst/doc ... NOTE
  'qpdf' made some significant size reductions:
     compacted 'OLIN.pdf' from 5698Kb to 850Kb
  consider running tools::compactPDF() on these files
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OLIN.Rcheck/00install.out:

* installing *source* package 'OLIN' ...
** R
** data
** inst
** preparing package for lazy loading
locfit 1.5-6 	 2010-01-20 
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

* DONE (OLIN)

OLIN.Rcheck/OLIN-Ex.timings:

nameusersystemelapsed
anovaint0.3470.0600.407
anovapin0.2490.0500.300
anovaplate0.2520.0480.301
anovaspatial0.6460.1210.780
backgroundCorrect21.1280.1721.314
bas0.0790.0120.091
colorbar.mxy0.1020.0200.122
fdr.int000
fdr.int20.0000.0010.001
fdr.spatial0.0000.0000.001
fdr.spatial20.0010.0010.000
fgbg.visu0.1960.0370.236
ino0.4910.1390.642
lin1.8100.3612.182
m2v0.1140.0210.135
ma.matrix0.6630.0290.694
ma.vector0.8400.0380.881
mxy.abs.plot0.1990.0280.246
mxy.plot0.1430.0370.181
mxy2.plot0.1180.0200.145
oin2.3460.4072.773
olin50.873 5.16056.704
p.int0.0000.0000.001
p.int2000
p.spatial0.0010.0000.001
p.spatial20.0010.0000.000
sig.mask0.0010.0010.001
sigint.plot000
sigint.plot20.0000.0010.000
sigxy.plot0.0010.0000.000
sigxy.plot2000
v2m0.0740.0080.082