Package: OLIN

Version: 1.30.0

Command: /home/biocbuild/bbs-2.8-bioc/R/bin/R CMD check --no-vignettes --timings OLIN_1.30.0.tar.gz

StartedAt: 2011-10-20 13:45:05 -0700 (Thu, 20 Oct 2011)

EndedAt: 2011-10-20 13:46:31 -0700 (Thu, 20 Oct 2011)

EllapsedTime: 85.4 seconds

RetCode: 0

Status:  OK

CheckDir: OLIN.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.8-bioc/meat/OLIN.Rcheck’
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘OLIN/DESCRIPTION’ ... OK
* this is package ‘OLIN’ version ‘1.30.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘OLIN’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    doc   5.6Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package ‘OLIN’ ...
** R
** data
** inst
** preparing package for lazy loading
locfit 1.5-6 	 2010-01-20 
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

* DONE (OLIN)

name	user	system	elapsed
anovaint	0.380	0.008	0.388
anovapin	0.292	0.008	0.303
anovaplate	0.276	0.008	0.282
anovaspatial	0.748	0.024	0.771
backgroundCorrect2	0.852	0.016	0.866
bas	0.056	0.000	0.058
colorbar.mxy	0.064	0.000	0.064
fdr.int	0	0	0
fdr.int2	0	0	0
fdr.spatial	0	0	0
fdr.spatial2	0	0	0
fgbg.visu	0.216	0.000	0.214
ino	0.32	0.00	0.32
lin	1.256	0.000	1.261
m2v	0.080	0.000	0.081
ma.matrix	0.440	0.008	0.446
ma.vector	0.624	0.000	0.625
mxy.abs.plot	0.092	0.012	0.132
mxy.plot	0.164	0.000	0.212
mxy2.plot	0.068	0.000	0.068
oin	1.420	0.000	1.417
olin	28.378	0.072	29.891
p.int	0	0	0
p.int2	0	0	0
p.spatial	0	0	0
p.spatial2	0	0	0
sig.mask	0	0	0
sigint.plot	0	0	0
sigint.plot2	0.000	0.000	0.001
sigxy.plot	0	0	0
sigxy.plot2	0	0	0
v2m	0.036	0.008	0.047