Rgraphviz 1.26.0
Kasper Hansen
| Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/Rgraphviz | | Last Changed Rev: 46401 / Revision: 49923 | | Last Changed Date: 2010-04-22 11:21:23 -0700 (Thu, 22 Apr 2010) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | [ ERROR ] | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'Rgraphviz/DESCRIPTION' ... OK
* preparing 'Rgraphviz':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'Rgraphviz' ...
Using the following environment variables
GRAPHVIZ_INSTALL_DIR=C:\/graphviz
GRAPHVIZ_INSTALL_MAJOR=2
GRAPHVIZ_INSTALL_MINOR=25
GRAPHVIZ_INSTALL_SUBMINOR=
Using the following compilation and linking flags for Rgraphviz
PKG_CPPFLAGS=-IC:\/graphviz/include/graphviz
PKG_LIBS=-LC:\/graphviz/bin -lgvc -lgraph -lcdt
GVIZ_DEFS=-DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32
Created file src/Makevars.win
Created file R/graphviz_build_version.R
** libs
making DLL ...
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c LL_funcs.c -o LL_funcs.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c Rgraphviz.c -o Rgraphviz.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c RgraphvizInit.c -o RgraphvizInit.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c agopen.c -o agopen.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c agread.c -o agread.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c agwrite.c -o agwrite.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c bezier.c -o bezier.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c buildEdgeList.c -o buildEdgeList.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c buildNodeList.c -o buildNodeList.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c doLayout.c -o doLayout.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c graphvizVersion.c -o graphvizVersion.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -IC:/graphviz/include/graphviz -DGRAPHVIZ_MAJOR=2 -DGRAPHVIZ_MINOR=25 -DWin32 -O2 -Wall -std=gnu99 -c init.c -o init.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o Rgraphviz.dll tmp.def LL_funcs.o Rgraphviz.o RgraphvizInit.o agopen.o agread.o agwrite.o bezier.o buildEdgeList.o buildNodeList.o doLayout.o graphvizVersion.o init.o -LC:/graphviz/bin -lgvc -lgraph -lcdt -LD:/biocbld/bbs-2.6-bioc/R/bin -lR
c:/rtools211/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.4.4/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -lgvc
c:/rtools211/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.4.4/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -lgraph
c:/rtools211/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.4.4/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -lcdt
collect2: ld returned 1 exit status
... done
ERROR: compilation failed for package 'Rgraphviz'
* removing 'D:/biocbld/bbs-2.6-bioc/tmpdir/Rinst111281304/Rgraphviz'
ERROR
Installation failed.
Removing 'D:/biocbld/bbs-2.6-bioc/tmpdir/Rinst111281304'