Rgraphviz

Provides plotting capabilities for R graph objects

Bioconductor version: 2.6

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package. Users on all platforms must install graphviz; see the README file, available in the source distribution of this file, for details.

Author: Jeff Gentry <jgentry at jimmy.harvard.edu>, Li Long <li.long at isb-sib.ch>, Robert Gentleman <rgentlem at fhcrc.org>, Seth Falcon <sfalcon at fhcrc.org>, Florian Hahne <fhahne at fhcrc.org>, Deepayan Sarkar <dsarkar at fhcrc.org>, Kasper Hansen <khansen at stat.berkeley.edu>

Maintainer: Kasper Hansen <khansen at stat.berkeley.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("Rgraphviz")

To cite this package in a publication, start R and enter:

    citation("Rgraphviz")

Documentation

PDF	R Script	A New Interface to Plot Graphs Using Rgraphviz
PDF	R Script	How To Plot A Graph Using Rgraphviz
PDF		Reference Manual

Details

biocViews	GraphsAndNetworks
Depends	R (>= 2.6.0), methods, utils, graph, grid
Imports	graph, graphics, grDevices, grid, methods, utils
Suggests
System Requirements	Graphviz version >= 2.2
License	Artistic-2.0
URL
Depends On Me	biocGraph, BioMVCClass, hyperdraw, KEGGgraph, nem, pathRender, ppiData
Imports Me	apComplex, biocGraph, nem
Suggests Me	altcdfenvs, BiocCaseStudies, Category, flowCore, geneplotter, globaltest, GOstats, oneChannelGUI, pkgDepTools, qpgraph, RpsiXML, Rtreemix, safe, SNAData, SPIA, SRAdb, topGO
Version	1.26.0
Since	Bioconductor 1.6 (R-2.1) or earlier

Package Downloads

Package Source	Rgraphviz_1.26.0.tar.gz
Windows Binary	Rgraphviz_1.26.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	Rgraphviz_1.26.0.tgz
Package Downloads Report	Download Stats

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