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Package 301/319HostnameOS / ArchBUILDCHECKBUILD BIN
TargetSearch 1.0.0
Alvaro Cuadros-Inostroza
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/TargetSearch
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64 [ OK ] OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: TargetSearch
Version: 1.0.0
Command: /home/biocbuild/bbs-2.4-bioc/R/bin/R CMD build TargetSearch
StartedAt: 2009-10-20 15:00:31 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 15:00:58 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 27.5 seconds
RetCode: 0
Status: OK
PackageFile: TargetSearch_1.0.0.tar.gz
PackageFileSize: 151.2 KiB

Command output

* checking for file 'TargetSearch/DESCRIPTION' ... OK
* preparing 'TargetSearch':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'TargetSearch' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c Rinit.c -o Rinit.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c find_peaks.c -o find_peaks.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c getLine.c -o getLine.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c netcdf_peak_finding.c -o netcdf_peak_finding.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c peakExtraction.c -o peakExtraction.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c ppc.c -o ppc.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o TargetSearch.so Rinit.o find_peaks.o getLine.o netcdf_peak_finding.o peakExtraction.o ppc.o -L/home/biocbuild/bbs-2.4-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'TargetSearch'
     Formats: text html latex example 
  FAMEoutliers                      text    html    latex   example
  FindPeaks                         text    html    latex   example
  ImportFameSettings                text    html    latex   example
  ImportLibrary                     text    html    latex   example
  ImportSamples                     text    html    latex   example
  NetCDFPeakFinding                 text    html    latex   example
  Profile                           text    html    latex   example
  ProfileCleanUp                    text    html    latex   example
  RIcorrect                         text    html    latex   example
  TargetSearch-package              text    html    latex
  Write.Results                     text    html    latex
  medianRILib                       text    html    latex   example
  peakCDFextraction                 text    html    latex
  peakFind                          text    html    latex   example
  plotFAME                          text    html    latex   example
  plotPeak                          text    html    latex   example
  plotRIdev                         text    html    latex   example
  plotSpectra                       text    html    latex   example
  ri2rt                             text    html    latex   example
  rt2ri                             text    html    latex   example
  sampleRI                          text    html    latex   example
  tsLib-class                       text    html    latex   example
  tsMSdata-class                    text    html    latex   example
  tsProfile-class                   text    html    latex   example
  tsRim-class                       text    html    latex   example
  tsSample-class                    text    html    latex   example
** building package indices ...
* DONE (TargetSearch)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'TargetSearch_1.0.0.tar.gz'