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Package 49/294HostnameOS / ArchBUILDCHECKBUILD BIN
BSgenome 1.10.5
H. Pages
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/BSgenome
Last Changed Rev: 37897 / Revision: 38965
Last Changed Date: 2009-03-11 00:00:55 -0700 (Wed, 11 Mar 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386 [ OK ] OK  OK 
Package: BSgenome
Version: 1.10.5
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build BSgenome
StartedAt: 2009-04-18 15:44:11 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 15:46:29 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 138.6 seconds
RetCode: 0
Status: OK
PackageFile: BSgenome_1.10.5.tar.gz
PackageFileSize: 335.9 KiB

Command output

* checking for file 'BSgenome/DESCRIPTION' ... OK
* preparing 'BSgenome':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'BSgenome' ...
** R
** inst
** preparing package for lazy loading
Loading required package: IRanges

Attaching package: 'IRanges'


	The following object(s) are masked from package:base :

	 cbind,
	 rbind,
	 sapply 

Loading required package: Biostrings

Attaching package: 'Biostrings'


	The following object(s) are masked from package:base :

	 chartr,
	 order,
	 substr,
	 substring 

** help
 >>> Building/Updating help pages for package 'BSgenome'
     Formats: text html latex example 
  BSParams-class                    text    html    latex
  BSgenome-class                    text    html    latex   example
  BSgenomeForge                     text    html    latex   example
  available.genomes                 text    html    latex   example
  bsapply                           text    html    latex   example
  getSeq                            text    html    latex   example
  injectSNPs                        text    html    latex   example
** building package indices ...
* DONE (BSgenome)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'BSgenome/inst/BSgenomeDataPkg-template/inst/extdata' is empty
* building 'BSgenome_1.10.5.tar.gz'