encoDnaseI 0.0-13
VJ Carey
| Snapshot Date: 2008-04-10 00:02:38 -0700 (Thu, 10 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/encoDnaseI | | Last Changed Rev: 606 / Revision: 624 | | Last Changed Date: 2008-04-05 03:22:38 -0700 (Sat, 05 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | ERROR | skipped | |
| lemming | Windows Server 2003 (32-bit) / x64 | [ ERROR ] | skipped | skipped |
| pitt | Mac OS X Tiger (10.4.11) / i386 | ERROR | skipped | skipped |
* checking for file 'encoDnaseI/DESCRIPTION' ... OK
* preparing 'encoDnaseI':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-data-experiment/tmpdir/Rinst40095220
---------- Making package encoDnaseI ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
installing man source files
installing indices
Loading required package: methods
not zipping data
installing help
>>> Building/Updating help pages for package 'encoDnaseI'
Formats: text html latex example chm
ALICOR text html latex example chm
missing link(s): snpScreenResult-class
encoDnaseI text html latex example chm
hg18track-class text html latex example chm
missing link(s): eSet-class VersionedBiobase-class Versioned-class
juxtaPlot text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-data-experiment\meat\encoDnaseI\chm\encoDnaseI.chm
Compile time: 0 minutes, 1 second
5 Topics
36 Local links
0 Internet links
1 Graphic
Created d:\biocbld\bbs-2.1-data-experiment\meat\encoDnaseI\chm\encoDnaseI.chm, 24,115 bytes
Compression decreased file by 5,807 bytes.
adding MD5 sums
* DONE (encoDnaseI)
* creating vignettes ... ERROR
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: lattice
Loading required package: hgfocus
Loading required package: geneplotter
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: mgu74av2
Loading required package: snpMatrix
Error: processing vignette 'dnaseUse.Rnw' failed with diagnostics:
chunk 5 (label=dogg)
Error : package 'snpMatrix' could not be loaded
In addition: Warning message:
In library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) :
there is no package called 'snpMatrix'
Execution halted