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encoDnaseI 0.0-13
VJ Carey
Snapshot Date: 2008-04-10 00:02:38 -0700 (Thu, 10 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/encoDnaseI
Last Changed Rev: 606 / Revision: 624
Last Changed Date: 2008-04-05 03:22:38 -0700 (Sat, 05 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64 [ ERROR ] skipped 
lemming Windows Server 2003 (32-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Tiger (10.4.11) / i386  ERROR  skipped  skipped 
Package: encoDnaseI
Version: 0.0-13
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build encoDnaseI
StartedAt: 2008-04-10 01:04:36 -0700 (Thu, 10 Apr 2008)
EndedAt: 2008-04-10 01:04:50 -0700 (Thu, 10 Apr 2008)
EllapsedTime: 14.0 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'encoDnaseI/DESCRIPTION' ... OK
* preparing 'encoDnaseI':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'encoDnaseI' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'encoDnaseI'
     Formats: text html latex example 
  ALICOR                            text    html    latex   example
  encoDnaseI                        text    html    latex   example
  hg18track-class                   text    html    latex   example
  juxtaPlot                         text    html    latex   example
** building package indices ...
Loading required package: methods
* DONE (encoDnaseI)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: lattice
Loading required package: hgfocus
Loading required package: geneplotter
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: mgu74av2
Loading required package: snpMatrix

Error: processing vignette 'dnaseUse.Rnw' failed with diagnostics:
 chunk 5 (label=dogg) 
Error : package 'snpMatrix' could not be loaded
In addition: Warning message:
In library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) :
  there is no package called 'snpMatrix'
Execution halted