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GO.db

A set of annotation maps describing the entire Gene Ontology


Bioconductor version: Release (3.18)

A set of annotation maps describing the entire Gene Ontology assembled using data from GO

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GO.db")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GO.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews AnnotationData, FunctionalAnnotation
Version 3.18.0
License Artistic-2.0
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.63.2)
Imports
System Requirements
URL
See More
Suggests DBI
Linking To
Enhances
Depends On Me annaffy, BicARE, davidTiling, geneXtendeR, goProfiles, GOSim, goTools, Homo.sapiens, Mus.musculus, PloGO2, Rattus.norvegicus, RnaSeqGeneEdgeRQL, SemDist, topGO
Imports Me ADAM, ADAMgui, adSplit, bioCancer, BioNAR, clusterProfiler, CNEr, compEpiTools, consICA, EnrichmentBrowser, ExpHunterSuite, famat, gage, GeneTonic, GenomicInteractionNodes, GOpro, GOSemSim, goseq, goSorensen, goSTAG, GOstats, goTools, ideal, MCbiclust, methylGSA, missMethyl, netOmics, NetSAM, netZooR, NoRCE, pcaExplorer, Pigengene, psygenet2r, restfulSE, rGREAT, rgsepd, rrvgo, SGCP, simplifyEnrichment, ViSEAGO
Suggests Me annotate, AnnotationDbi, AnnotationForge, appreci8R, BiocSet, BioMartGOGeneSets, Category, categoryCompare, chipenrich.data, ChIPpeakAnno, erma, esetVis, fgga, FGNet, GlobalAncova, globaltest, GSEABase, hpar, InteractiveComplexHeatmap, interactiveDisplay, InterMineR, iSEEpathways, iSEEu, limma, mgsa, MLP, msigdb, oppar, pareg, phenoTest, pRoloc, RforProteomics, rols, RTopper, safe, scde, simona, SomaScan.db, sparrow, SpliceWiz, systemPipeR, TFutils, yeastExpData
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GO.db_3.18.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/GO.db/
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