This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see RTopper.

This package is designed to perform Gene Set Analysis across multiple genomic platforms

Bioconductor version: 3.18

the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.

Author: Luigi Marchionni <marchion at jhu.edu>, Svitlana Tyekucheva <svitlana at jimmy.harvard.edu>

Maintainer: Luigi Marchionni <marchion at jhu.edu>

Citation (from within R, enter citation("RTopper")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

RTopper user's manual PDF R Script
Reference Manual PDF


biocViews Microarray, Software
Version 1.48.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License GPL (>= 3) + file LICENSE
Depends R (>= 2.12.0), Biobase
Imports limma, multtest
System Requirements
See More
Suggests org.Hs.eg.db, KEGGREST, GO.db
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RTopper_1.48.0.tar.gz
Windows Binary RTopper_1.48.0.zip
macOS Binary (x86_64) RTopper_1.48.0.tgz
macOS Binary (arm64) RTopper_1.48.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RTopper
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RTopper
Bioc Package Browser https://code.bioconductor.org/browse/RTopper/
Package Short Url https://bioconductor.org/packages/RTopper/
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