TCGAWorkflowData

DOI: 10.18129/B9.bioc.TCGAWorkflowData  

This is the development version of TCGAWorkflowData; for the stable release version, see TCGAWorkflowData.

Data for TCGA Workflow

Bioconductor version: Development (3.18)

This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".

Author: Tiago Chedraoui Silva <tiagochst at usp.br>

Maintainer: Tiago Chedraoui Silva <tiagochst at usp.br>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TCGAWorkflowData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData
Version	1.25.0
License	GPL-3
Depends	R (>= 3.4.0)
Imports	SummarizedExperiment
LinkingTo
Suggests	knitr, rmarkdown, pander, testthat
SystemRequirements
Enhances
URL	https://f1000research.com/articles/5-1542/v2
BugReports	https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues
Depends On Me
Imports Me	TCGAWorkflow
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/TCGAWorkflowData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/TCGAWorkflowData
Package Short Url	https://bioconductor.org/packages/TCGAWorkflowData/
Package Downloads Report	Download Stats