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biocthis

This is the development version of biocthis; for the stable release version, see biocthis.

Automate package and project setup for Bioconductor packages


Bioconductor version: Development (3.19)

This package expands the usethis package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.

Author: Leonardo Collado-Torres [aut, cre] , Marcel Ramos [ctb]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("biocthis")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("biocthis")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocthis")
biocthis developer notes HTML R Script
Introduction to biocthis HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ReportWriting, Software
Version 1.13.0
In Bioconductor since BioC 3.12 (R-4.0) (3.5 years)
License Artistic-2.0
Depends
Imports BiocManager, fs, glue, rlang, styler, usethis (>= 2.0.1)
System Requirements
URL https://github.com/lcolladotor/biocthis
Bug Reports https://support.bioconductor.org/tag/biocthis
See More
Suggests BiocStyle, covr, devtools, knitr, pkgdown, RefManageR, rmarkdown, sessioninfo, testthat, utils
Linking To
Enhances
Depends On Me
Imports Me HubPub
Suggests Me tripr
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biocthis_1.13.0.tar.gz
Windows Binary biocthis_1.13.0.zip
macOS Binary (x86_64) biocthis_1.13.0.tgz
macOS Binary (arm64) biocthis_1.13.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/biocthis
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biocthis
Bioc Package Browser https://code.bioconductor.org/browse/biocthis/
Package Short Url https://bioconductor.org/packages/biocthis/
Package Downloads Report Download Stats