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This is the development version of GSReg; for the stable release version, see GSReg.

Gene Set Regulation (GS-Reg)

Bioconductor version: Development (3.19)

A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).

Author: Bahman Afsari <bahman at jhu.edu>, Elana J. Fertig <ejfertig at jhmi.edu>

Maintainer: Bahman Afsari <bahman at jhu.edu>, Elana J. Fertig <ejfertig at jhmi.edu>

Citation (from within R, enter citation("GSReg")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Working with the GSReg package PDF R Script
Reference Manual PDF


biocViews AlternativeSplicing, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Pathways, Software
Version 1.37.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 2.13.1), Homo.sapiens, org.Hs.eg.db, GenomicFeatures, AnnotationDbi
System Requirements
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Suggests GenomicRanges, GSBenchMark
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GSReg_1.37.0.tar.gz
Windows Binary GSReg_1.37.0.zip
macOS Binary (x86_64) GSReg_1.37.0.tgz
macOS Binary (arm64) GSReg_1.37.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/GSReg
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GSReg
Bioc Package Browser https://code.bioconductor.org/browse/GSReg/
Package Short Url https://bioconductor.org/packages/GSReg/
Package Downloads Report Download Stats