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bcellViper

Human B-cell transcriptional interactome and normal human B-cell expression data


Bioconductor version: Release (3.18)

This package provides a human B-cell context-specific transcriptional regulatory network and a human normal B-cells dataset for the examples in package viper.

Author: Mariano Javier Alvarez

Maintainer: Mariano Javier Alvarez <malvarez at c2b2.columbia.edu>

Citation (from within R, enter citation("bcellViper")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bcellViper")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bcellViper")
Using bcellViper PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews CancerData, ExperimentData, Genome, Homo_sapiens_Data
Version 1.38.0
License GPL (>=2)
Depends R (>= 2.14.0), Biobase, methods
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me dorothea
Suggests Me GenomicSuperSignature, iterClust, pageRank, viper
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package bcellViper_1.38.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/bcellViper
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/bcellViper
Package Short Url https://bioconductor.org/packages/bcellViper/
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