EpiMix.data
Data for the EpiMix package
Bioconductor version: Release (3.19)
Supporting data for the EpiMix R package. It include: - HM450_lncRNA_probes.rda - HM450_miRNA_probes.rda - EPIC_lncRNA_probes.rda - EPIC_miRNA_probes.rda - EpigenomeMap.rda - LUAD.sample.annotation - TCGA_BatchData - MET.data - mRNA.data - microRNA.data - lncRNA.data - Sample_EpiMixResults_lncRNA - Sample_EpiMixResults_miRNA - Sample_EpiMixResults_Regular - Sample_EpiMixResults_Enhancer - lncRNA expression data of tumors from TCGA that are stored in the ExperimentHub.
Author: Yuanning Zheng [aut, cre]
Maintainer: Yuanning Zheng <eric2021 at stanford.edu>
citation("EpiMix.data")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("EpiMix.data")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("EpiMix.data")
vignette | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData |
Version | 1.6.0 |
License | GPL-3 |
Depends | R (>= 4.2.0), ExperimentHub(>= 0.99.6) |
Imports | |
System Requirements | |
URL | |
Bug Reports | https://github.com/gevaertlab/EpiMix/issues |
See More
Suggests | rmarkdown, knitr |
Linking To | |
Enhances | |
Depends On Me | EpiMix |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | EpiMix.data_1.6.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/EpiMix.data |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/EpiMix.data |
Package Short Url | https://bioconductor.org/packages/EpiMix.data/ |
Package Downloads Report | Download Stats |