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A collection of pre-processing functions

Bioconductor version: Release (3.18)

A library of core preprocessing routines.

Author: Ben Bolstad <bmb at bmbolstad.com>

Maintainer: Ben Bolstad <bmb at bmbolstad.com>

Citation (from within R, enter citation("preprocessCore")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews Infrastructure, Software
Version 1.64.0
In Bioconductor since BioC 2.1 (R-2.6) (16.5 years)
License LGPL (>= 2)
Imports stats
System Requirements
URL https://github.com/bmbolstad/preprocessCore
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Linking To
Depends On Me affyPLM, AgiMicroRna, cqn, crlmm, RefPlus, SCATE
Imports Me affy, BloodGen3Module, bnbc, ChAMP, cn.farms, DAPAR, EMDomics, ExiMiR, fastLiquidAssociation, frma, frmaTools, GSE13015, hipathia, iCheck, ImmuneSpaceR, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn
Suggests Me MsCoreUtils, multiClust, QFeatures, roastgsa, scp, splatter, wateRmelon
Links To Me affy, affyPLM, crlmm, oligo
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Follow Installation instructions to use this package in your R session.

Source Package preprocessCore_1.64.0.tar.gz
Windows Binary preprocessCore_1.64.0.zip
macOS Binary (x86_64) preprocessCore_1.64.0.tgz
macOS Binary (arm64) preprocessCore_1.64.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/preprocessCore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/preprocessCore
Bioc Package Browser https://code.bioconductor.org/browse/preprocessCore/
Package Short Url https://bioconductor.org/packages/preprocessCore/
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