powerTCR
Model-Based Comparative Analysis of the TCR Repertoire
Bioconductor version: Release (3.19)
This package provides a model for the clone size distribution of the TCR repertoire. Further, it permits comparative analysis of TCR repertoire libraries based on theoretical model fits.
Author: Hillary Koch
Maintainer: Hillary Koch <hillary.koch01 at gmail.com>
Citation (from within R, enter
citation("powerTCR")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("powerTCR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("powerTCR")
Vignette Title | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | BiomedicalInformatics, Clustering, Software |
Version | 1.24.0 |
In Bioconductor since | BioC 3.7 (R-3.5) (6.5 years) |
License | Artistic-2.0 |
Depends | |
Imports | cubature, doParallel, evmix, foreach, magrittr, methods, parallel, purrr, stats, truncdist, vegan, VGAM |
System Requirements | |
URL |
See More
Suggests | BiocStyle, knitr, rmarkdown, RUnit, BiocGenerics |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | powerTCR_1.24.0.tar.gz |
Windows Binary | powerTCR_1.24.0.zip |
macOS Binary (x86_64) | powerTCR_1.24.0.tgz |
macOS Binary (arm64) | powerTCR_1.24.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/powerTCR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/powerTCR |
Bioc Package Browser | https://code.bioconductor.org/browse/powerTCR/ |
Package Short Url | https://bioconductor.org/packages/powerTCR/ |
Package Downloads Report | Download Stats |