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This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
Bioconductor version: Release (3.17)
GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait. models.
Author: Wei Hao, Minsun Song, John D. Storey
Maintainer: Wei Hao <whao at princeton.edu>, John D. Storey <jstorey at princeton.edu>
Citation (from within R,
enter citation("gcatest")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("gcatest")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | DimensionReduction, GenomeWideAssociation, PrincipalComponent, SNP, Software |
Version | 1.30.0 |
In Bioconductor since | BioC 3.2 (R-3.2) (7.5 years) |
License | GPL-3 |
Depends | R (>= 3.2) |
Imports | lfa |
LinkingTo | |
Suggests | knitr, ggplot2 |
SystemRequirements | |
Enhances | |
URL | https://github.com/StoreyLab/gcatest |
BugReports | https://github.com/StoreyLab/gcatest/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/gcatest |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/gcatest |
Package Short Url | https://bioconductor.org/packages/gcatest/ |
Package Downloads Report | Download Stats |
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