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Single-cell RNA sequencing data normalization

Bioconductor version: Release (3.19)

bayNorm is used for normalizing single-cell RNA-seq data.

Author: Wenhao Tang [aut, cre], Fran<U+00E7>ois Bertaux [aut], Philipp Thomas [aut], Claire Stefanelli [aut], Malika Saint [aut], Samuel Marguerat [aut], Vahid Shahrezaei [aut]

Maintainer: Wenhao Tang <wt215 at>

Citation (from within R, enter citation("bayNorm")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Introduction to bayNorm HTML R Script
Reference Manual PDF


biocViews ImmunoOncology, Normalization, RNASeq, Sequencing, SingleCell, Software
Version 1.22.0
In Bioconductor since BioC 3.8 (R-3.5) (5.5 years)
License GPL (>= 2)
Depends R (>= 3.5)
Imports Rcpp (>= 0.12.12), BB, foreach, iterators, doSNOW, Matrix, parallel, MASS, locfit, fitdistrplus, stats, methods, graphics, grDevices, SingleCellExperiment, SummarizedExperiment, BiocParallel, utils
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Suggests knitr, rmarkdown, BiocStyle, devtools, testthat
Linking To Rcpp, RcppArmadillo, RcppProgress
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Follow Installation instructions to use this package in your R session.

Source Package bayNorm_1.22.0.tar.gz
Windows Binary (64-bit only)
macOS Binary (x86_64) bayNorm_1.22.0.tgz
macOS Binary (arm64) bayNorm_1.22.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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