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Using TileDB as a DelayedArray Backend

Bioconductor version: Release (3.18)

Implements a DelayedArray backend for reading and writing dense or sparse arrays in the TileDB format. The resulting TileDBArrays are compatible with all Bioconductor pipelines that can accept DelayedArray instances.

Author: Aaron Lun [aut, cre], Genentech, Inc. [cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("TileDBArray")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

User guide HTML R Script
Reference Manual PDF


biocViews DataRepresentation, Infrastructure, Software
Version 1.12.0
In Bioconductor since BioC 3.12 (R-4.0) (3.5 years)
License MIT + file LICENSE
Depends DelayedArray(>= 0.27.2)
Imports methods, Rcpp, tiledb, S4Vectors
System Requirements
URL https://github.com/LTLA/TileDBArray
Bug Reports https://github.com/LTLA/TileDBArray
See More
Suggests knitr, Matrix, rmarkdown, BiocStyle, BiocParallel, testthat
Linking To Rcpp
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TileDBArray_1.12.0.tar.gz
Windows Binary TileDBArray_1.12.0.zip
macOS Binary (x86_64) TileDBArray_1.12.0.tgz
macOS Binary (arm64) TileDBArray_1.12.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/TileDBArray
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TileDBArray
Bioc Package Browser https://code.bioconductor.org/browse/TileDBArray/
Package Short Url https://bioconductor.org/packages/TileDBArray/
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